Agentic Gut Model

Test ingredient impact on gut biology before real world trials

GutSim is an AI-powered digital twin of the human gut. It synthesizes a growing body of published in-vitro research to deliver evidence-based predictions on microbiome composition, SCFAs, pH, gas production, and bloating risk.

1000s
Empirical measurements
13
Metric categories
~60s
Per prediction

Gut health R&D is flying blind

Thousands of in-vitro gut model studies exist, but findings are trapped in PDFs with no way to query, synthesize, or predict across them.

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Fragmented knowledge

Findings scattered across journals. Researchers re-discover what's already known because there's no unified, queryable database of gut model results.

Expensive, slow experiments

A single in-vitro gut model experiment costs $50K-$150K and takes months. Companies test ingredients that already have published data they can't easily find.

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Guesswork in formulation

"Will this dose of inulin cause bloating?" has no quick, evidence-based answer. Product teams rely on marketing claims, not integrated evidence.

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No dose-response models

No system synthesizes evidence across studies to predict how different doses affect different regions of the colon with calibrated confidence.

Ask a question. Get an evidence-based answer.

GutSim continuously ingests published gut model research and builds a structured knowledge base. When you ask a question, AI reasons over the evidence to deliver predictions you can trust.

1

Ask Your Question

Enter any ingredient, dose, or combination — "5 g/day inulin", "inulin + LGG", or compare two doses

2

Evidence Gathering

GutSim searches its knowledge base for relevant measurements, mechanistic rules, and similar studies

3

Cross-Study Synthesis

Findings are synthesized across multiple studies, weighted by relevance, quality, and dose proximity

4

Confidence Calibration

Every prediction is assigned a calibrated confidence score based on the strength and breadth of available evidence

5

Structured Report

Per-compartment predictions for SCFAs, microbiome, pH, gas, bloating risk — with full evidence trail

Evidence-grounded, not black-box

Every prediction is transparent, dose-aware, and traceable back to the studies that support it.

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Dose-aware reasoning

Knows what doses have been tested. Flags extrapolation beyond studied ranges and adjusts confidence accordingly. Compare multiple doses side-by-side.

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Multi-ingredient analysis

"Inulin and LGG" — searches each separately and the combination, with per-ingredient attribution weights showing what drives each prediction.

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Hybrid confidence scoring

AI assesses evidence quality, then a deterministic post-processor caps scores by study count and data source type. No over-confident claims.

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Full evidence trail

Every prediction links to the measurements, rules, and studies that support it. See exactly which papers the AI used to reach its conclusion.

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Compartment-specific

Predictions per gut region — ascending, transverse, and descending colon — each with distinct pH, retention time, and microbial profiles.

⚠️

Risk transparency

Bloating risk and fermentation intensity show the formula, input sub-scores, and reasoning. Every number is explainable and auditable.

Built on real published research

GutSim's knowledge base is constructed from peer-reviewed in-vitro gut model studies — and growing continuously as new research is published.

1000s
Empirical Measurements
100s
Mechanistic Rules
13
Metric Categories
7
Gut Compartments
~60s
Per Prediction
Growing Knowledge Base
Inulin FOS GOS L. rhamnosus B. longum L. casei Polyphenols Grape extract HMOs Resistant starch Magnesium BB-12

From formulation to validation

GutSim helps anyone who needs to understand how ingredients behave in the human gut before committing to expensive experiments.

R&D Teams

Pre-screen ingredients

Test hypotheses about prebiotics, probiotics, and synbiotics in seconds instead of months. Identify the most promising candidates before committing lab resources.

CROs & Research Labs

Design better experiments

Use GutSim to identify knowledge gaps, set dose ranges, and validate findings against the existing body of published gut model research.

Regulatory & Claims

Evidence-backed claims

Generate reports linking product ingredients to published evidence, with confidence scores and full citation trails for regulatory submissions.

Get in touch

Whether you're interested in a demo, a pilot partnership, or research collaboration — we'd love to hear from you.

Or email us directly at info@gutsim.ai

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